06,16,2021

 HeunNet: Extending ResNet using Heun's Methods2021-05-13   ${\displaystyle \cong }$ There is an analogy between the ResNet (Residual Network) architecture for deep neural networks and an Euler solver for an ODE. The transformation performed by each layer resembles an Euler step in solving an ODE. We consider the Heun Method, which involves a single predictor-corrector cycle, and complete the analogy, building a predictor-corrector variant of ResNet, which we call a HeunNet. Just as Heun's method is more accurate than Euler's, experiments show that HeunNet achieves high accuracy with low computational (both training and test) time compared to both vanilla recurrent neural networks and other ResNet variants. Accuracy and Architecture Studies of Residual Neural Network solving Ordinary Differential Equations2021-01-10   ${\displaystyle \cong }$ In this paper we consider utilizing a residual neural network (ResNet) to solve ordinary differential equations. Stochastic gradient descent method is applied to obtain the optimal parameter set of weights and biases of the network. We apply forward Euler, Runge-Kutta2 and Runge-Kutta4 finite difference methods to generate three sets of targets training the ResNet and carry out the target study. The well trained ResNet behaves just as its counterpart of the corresponding one-step finite difference method. In particular, we carry out (1) the architecture study in terms of number of hidden layers and neurons per layer to find the optimal ResNet structure; (2) the target study to verify the ResNet solver behaves as accurate as its finite difference method counterpart; (3) solution trajectory simulation. Even the ResNet solver looks like and is implemented in a way similar to forward Euler scheme, its accuracy can be as high as any one step method. A sequence of numerical examples are presented to demonstrate the performance of the ResNet solver. When are Neural ODE Solutions Proper ODEs?2020-07-30   ${\displaystyle \cong }$ A key appeal of the recently proposed Neural Ordinary Differential Equation(ODE) framework is that it seems to provide a continuous-time extension of discrete residual neural networks. As we show herein, though, trained Neural ODE models actually depend on the specific numerical method used during training. If the trained model is supposed to be a flow generated from an ODE, it should be possible to choose another numerical solver with equal or smaller numerical error without loss of performance. We observe that if training relies on a solver with overly coarse discretization, then testing with another solver of equal or smaller numerical error results in a sharp drop in accuracy. In such cases, the combination of vector field and numerical method cannot be interpreted as a flow generated from an ODE, which arguably poses a fatal breakdown of the Neural ODE concept. We observe, however, that there exists a critical step size beyond which the training yields a valid ODE vector field. We propose a method that monitors the behavior of the ODE solver during training to adapt its step size, aiming to ensure a valid ODE without unnecessarily increasing computational cost. We verify this adaption algorithm on two common bench mark datasets as well as a synthetic dataset. Furthermore, we introduce a novel synthetic dataset in which the underlying ODE directly generates a classification task. Predicting dynamical system evolution with residual neural networks2019-10-11   ${\displaystyle \cong }$ Forecasting time series and time-dependent data is a common problem in many applications. One typical example is solving ordinary differential equation (ODE) systems $\dot{x}=F(x)$. Oftentimes the right hand side function $F(x)$ is not known explicitly and the ODE system is described by solution samples taken at some time points. Hence, ODE solvers cannot be used. In this paper, a data-driven approach to learning the evolution of dynamical systems is considered. We show how by training neural networks with ResNet-like architecture on the solution samples, models can be developed to predict the ODE system solution further in time. By evaluating the proposed approaches on three test ODE systems, we demonstrate that the neural network models are able to reproduce the main dynamics of the systems qualitatively well. Moreover, the predicted solution remains stable for much longer times than for other currently known models. On-line Non-Convex Constrained Optimization2019-09-16   ${\displaystyle \cong }$ Time-varying non-convex continuous-valued non-linear constrained optimization is a fundamental problem. We study conditions wherein a momentum-like regularising term allow for the tracking of local optima by considering an ordinary differential equation (ODE). We then derive an efficient algorithm based on a predictor-corrector method, to track the ODE solution. Acceleration via Symplectic Discretization of High-Resolution Differential Equations2019-11-04   ${\displaystyle \cong }$ We study first-order optimization methods obtained by discretizing ordinary differential equations (ODEs) corresponding to Nesterov's accelerated gradient methods (NAGs) and Polyak's heavy-ball method. We consider three discretization schemes: an explicit Euler scheme, an implicit Euler scheme, and a symplectic scheme. We show that the optimization algorithm generated by applying the symplectic scheme to a high-resolution ODE proposed by Shi et al. [2018] achieves an accelerated rate for minimizing smooth strongly convex functions. On the other hand, the resulting algorithm either fails to achieve acceleration or is impractical when the scheme is implicit, the ODE is low-resolution, or the scheme is explicit. Generative ODE Modeling with Known Unknowns2020-03-24   ${\displaystyle \cong }$ In several crucial applications, domain knowledge is encoded by a system of ordinary differential equations (ODE). A motivating example is intensive care unit patients: The dynamics of some vital physiological variables such as heart rate, blood pressure and arterial compliance can be approximately described by a known system of ODEs. Typically, some of the ODE variables are directly observed while some are unobserved, and in addition many other variables are observed but not modeled by the ODE, for example body temperature. Importantly, the unobserved ODE variables are known-unknowns'': We know they exist and their functional dynamics, but cannot measure them directly, nor do we know the function tying them to all observed measurements. Estimating these known-unknowns is often highly valuable to physicians. Under this scenario we wish to: (i) learn the static parameters of the ODE generating each observed time-series (ii) infer the dynamic sequence of all ODE variables including the known-unknowns, and (iii) extrapolate the future of the ODE variables and the observations of the time-series. We address this task with a variational autoencoder incorporating the known ODE function, called GOKU-net for Generative ODE modeling with Known Unknowns. We test our method on videos of pendulums with unknown length, and a model of the cardiovascular system. Differentiable Likelihoods for Fast Inversion of 'Likelihood-Free' Dynamical Systems2020-06-29   ${\displaystyle \cong }$ Likelihood-free (a.k.a. simulation-based) inference problems are inverse problems with expensive, or intractable, forward models. ODE inverse problems are commonly treated as likelihood-free, as their forward map has to be numerically approximated by an ODE solver. This, however, is not a fundamental constraint but just a lack of functionality in classic ODE solvers, which do not return a likelihood but a point estimate. To address this shortcoming, we employ Gaussian ODE filtering (a probabilistic numerical method for ODEs) to construct a local Gaussian approximation to the likelihood. This approximation yields tractable estimators for the gradient and Hessian of the (log-)likelihood. Insertion of these estimators into existing gradient-based optimization and sampling methods engenders new solvers for ODE inverse problems. We demonstrate that these methods outperform standard likelihood-free approaches on three benchmark-systems. Interpolation between Residual and Non-Residual Networks2020-06-26   ${\displaystyle \cong }$ Although ordinary differential equations (ODEs) provide insights for designing network architectures, its relationship with the non-residual convolutional neural networks (CNNs) is still unclear. In this paper, we present a novel ODE model by adding a damping term. It can be shown that the proposed model can recover both a ResNet and a CNN by adjusting an interpolation coefficient. Therefore, the damped ODE model provides a unified framework for the interpretation of residual and non-residual networks. The Lyapunov analysis reveals better stability of the proposed model, and thus yields robustness improvement of the learned networks. Experiments on a number of image classification benchmarks show that the proposed model substantially improves the accuracy of ResNet and ResNeXt over the perturbed inputs from both stochastic noise and adversarial attack methods. Moreover, the loss landscape analysis demonstrates the improved robustness of our method along the attack direction. Convergence and sample complexity of gradient methods for the model-free linear quadratic regulator problem2019-12-26   ${\displaystyle \cong }$ Model-free reinforcement learning attempts to find an optimal control action for an unknown dynamical system by directly searching over the parameter space of controllers. The convergence behavior and statistical properties of these approaches are often poorly understood because of the nonconvex nature of the underlying optimization problems as well as the lack of exact gradient computation. In this paper, we take a step towards demystifying the performance and efficiency of such methods by focusing on the standard infinite-horizon linear quadratic regulator problem for continuous-time systems with unknown state-space parameters. We establish exponential stability for the ordinary differential equation (ODE) that governs the gradient-flow dynamics over the set of stabilizing feedback gains and show that a similar result holds for the gradient descent method that arises from the forward Euler discretization of the corresponding ODE. We also provide theoretical bounds on the convergence rate and sample complexity of a random search method. Our results demonstrate that the required simulation time for achieving $?$-accuracy in a model-free setup and the total number of function evaluations both scale as $\log \, (1/?)$. Explainable Tensorized Neural Ordinary Differential Equations forArbitrary-step Time Series Prediction2020-11-26   ${\displaystyle \cong }$ We propose a continuous neural network architecture, termed Explainable Tensorized Neural Ordinary Differential Equations (ETN-ODE), for multi-step time series prediction at arbitrary time points. Unlike the existing approaches, which mainly handle univariate time series for multi-step prediction or multivariate time series for single-step prediction, ETN-ODE could model multivariate time series for arbitrary-step prediction. In addition, it enjoys a tandem attention, w.r.t. temporal attention and variable attention, being able to provide explainable insights into the data. Specifically, ETN-ODE combines an explainable Tensorized Gated Recurrent Unit (Tensorized GRU or TGRU) with Ordinary Differential Equations (ODE). The derivative of the latent states is parameterized with a neural network. This continuous-time ODE network enables a multi-step prediction at arbitrary time points. We quantitatively and qualitatively demonstrate the effectiveness and the interpretability of ETN-ODE on five different multi-step prediction tasks and one arbitrary-step prediction task. Extensive experiments show that ETN-ODE can lead to accurate predictions at arbitrary time points while attaining best performance against the baseline methods in standard multi-step time series prediction. Accelerating ODE-Based Neural Networks on Low-Cost FPGAs2020-12-31   ${\displaystyle \cong }$ ODENet is a deep neural network architecture in which a stacking structure of ResNet is implemented with an ordinary differential equation (ODE) solver. It can reduce the number of parameters and strike a balance between accuracy and performance by selecting a proper solver. It is also possible to improve the accuracy while keeping the same number of parameters on resource-limited edge devices. In this paper, using Euler method as an ODE solver, a part of ODENet is implemented as a dedicated logic on a low-cost FPGA (Field-Programmable Gate Array) board, such as PYNQ-Z2 board. Two variants, one for high accuracy and the other for performance, are proposed and implemented on the FPGA board as well. They are evaluated in terms of parameter size, accuracy, execution time, and resource utilization on the FPGA. The results show that it is expected that an overall execution time of ODENet and its variants is improved by up to 1.77 times compared to a pure software execution if their convolution layers are executed by nine multiply-add units. Neural Ordinary Differential Equation based Recurrent Neural Network Model2020-05-19   ${\displaystyle \cong }$ Neural differential equations are a promising new member in the neural network family. They show the potential of differential equations for time series data analysis. In this paper, the strength of the ordinary differential equation (ODE) is explored with a new extension. The main goal of this work is to answer the following questions: (i)~can ODE be used to redefine the existing neural network model? (ii)~can Neural ODEs solve the irregular sampling rate challenge of existing neural network models for a continuous time series, i.e., length and dynamic nature, (iii)~how to reduce the training and evaluation time of existing Neural ODE systems? This work leverages the mathematical foundation of ODEs to redesign traditional RNNs such as Long Short-Term Memory (LSTM) and Gated Recurrent Unit (GRU). The main contribution of this paper is to illustrate the design of two new ODE-based RNN models (GRU-ODE model and LSTM-ODE) which can compute the hidden state and cell state at any point of time using an ODE solver. These models reduce the computation overhead of hidden state and cell state by a vast amount. The performance evaluation of these two new models for learning continuous time series with irregular sampling rate is then demonstrated. Experiments show that these new ODE based RNN models require less training time than Latent ODEs and conventional Neural ODEs. They can achieve higher accuracy quickly, and the design of the neural network is simpler than, previous neural ODE systems. Adversarial Robustness of Stabilized NeuralODEs Might be from Obfuscated Gradients2020-09-28   ${\displaystyle \cong }$ In this paper we introduce a provably stable architecture for Neural Ordinary Differential Equations (ODEs) which achieves non-trivial adversarial robustness under white-box adversarial attacks even when the network is trained naturally. For most existing defense methods withstanding strong white-box attacks, to improve robustness of neural networks, they need to be trained adversarially, hence have to strike a trade-off between natural accuracy and adversarial robustness. Inspired by dynamical system theory, we design a stabilized neural ODE network named SONet whose ODE blocks are skew-symmetric and proved to be input-output stable. With natural training, SONet can achieve comparable robustness with the state-of-the-art adversarial defense methods, without sacrificing natural accuracy. Even replacing only the first layer of a ResNet by such a ODE block can exhibit further improvement in robustness, e.g., under PGD-20 ($\ell_\infty=0.031$) attack on CIFAR-10 dataset, it achieves 91.57\% and natural accuracy and 62.35\% robust accuracy, while a counterpart architecture of ResNet trained with TRADES achieves natural and robust accuracy 76.29\% and 45.24\%, respectively. To understand possible reasons behind this surprisingly good result, we further explore the possible mechanism underlying such an adversarial robustness. We show that the adaptive stepsize numerical ODE solver, DOPRI5, has a gradient masking effect that fails the PGD attacks which are sensitive to gradient information of training loss; on the other hand, it cannot fool the CW attack of robust gradients and the SPSA attack that is gradient-free. This provides a new explanation that the adversarial robustness of ODE-based networks mainly comes from the obfuscated gradients in numerical ODE solvers. Combining GANs and AutoEncoders for Efficient Anomaly Detection2020-11-16   ${\displaystyle \cong }$ Deep learned models are now largely adopted in different fields, and they generally provide superior performances with respect to classical signal-based approaches. Notwithstanding this, their actual reliability when working in an unprotected environment is far enough to be proven. In this work, we consider a novel deep neural network architecture, named Neural Ordinary Differential Equations (N-ODE), that is getting particular attention due to an attractive property --- a test-time tunable trade-off between accuracy and efficiency. This paper analyzes the robustness of N-ODE image classifiers when faced against a strong adversarial attack and how its effectiveness changes when varying such a tunable trade-off. We show that adversarial robustness is increased when the networks operate in different tolerance regimes during test time and training time. On this basis, we propose a novel adversarial detection strategy for N-ODE nets based on the randomization of the adaptive ODE solver tolerance. Our evaluation performed on standard image classification benchmarks shows that our detection technique provides high rejection of adversarial examples while maintaining most of the original samples under white-box attacks and zero-knowledge adversaries. On the space-time expressivity of ResNets2020-02-27   ${\displaystyle \cong }$ Residual networks (ResNets) are a deep learning architecture that substantially improved the state of the art performance in certain supervised learning tasks. Since then, they have received continuously growing attention. ResNets have a recursive structure $x_{k+1} = x_k + R_k(x_k)$ where $R_k$ is a neural network called a residual block. This structure can be seen as the Euler discretisation of an associated ordinary differential equation (ODE) which is called a neural ODE. Recently, ResNets were proposed as the space-time approximation of ODEs which are not of this neural type. To elaborate this connection we show that by increasing the number of residual blocks as well as their expressivity the solution of an arbitrary ODE can be approximated in space and time simultaneously by deep ReLU ResNets. Further, we derive estimates on the complexity of the residual blocks required to obtain a prescribed accuracy under certain regularity assumptions. Stiff Neural Ordinary Differential Equations2021-03-29   ${\displaystyle \cong }$ Neural Ordinary Differential Equations (ODE) are a promising approach to learn dynamic models from time-series data in science and engineering applications. This work aims at learning Neural ODE for stiff systems, which are usually raised from chemical kinetic modeling in chemical and biological systems. We first show the challenges of learning neural ODE in the classical stiff ODE systems of Robertson's problem and propose techniques to mitigate the challenges associated with scale separations in stiff systems. We then present successful demonstrations in stiff systems of Robertson's problem and an air pollution problem. The demonstrations show that the usage of deep networks with rectified activations, proper scaling of the network outputs as well as loss functions, and stabilized gradient calculations are the key techniques enabling the learning of stiff neural ODE. The success of learning stiff neural ODE opens up possibilities of using neural ODEs in applications with widely varying time-scales, like chemical dynamics in energy conversion, environmental engineering, and the life sciences. Differentiable Implicit Layers2020-10-14   ${\displaystyle \cong }$ In this paper, we introduce an efficient backpropagation scheme for non-constrained implicit functions. These functions are parametrized by a set of learnable weights and may optionally depend on some input; making them perfectly suitable as learnable layer in a neural network. We demonstrate our scheme on different applications: (i) neural ODEs with the implicit Euler method, and (ii) system identification in model predictive control. Augmenting Neural Differential Equations to Model Unknown Dynamical Systems with Incomplete State Information2020-08-18   ${\displaystyle \cong }$ Neural Ordinary Differential Equations replace the right-hand side of a conventional ODE with a neural net, which by virtue of the universal approximation theorem, can be trained to the representation of any function. When we do not know the function itself, but have state trajectories (time evolution) of the ODE system we can still train the neural net to learn the representation of the underlying but unknown ODE. However if the state of the system is incompletely known then the right-hand side of the ODE cannot be calculated. The derivatives to propagate the system are unavailable. We show that a specially augmented Neural ODE can learn the system when given incomplete state information. As a worked example we apply neural ODEs to the Lotka-Voltera problem of 3 species, rabbits, wolves, and bears. We show that even when the data for the bear time series is removed the remaining time series of the rabbits and wolves is sufficient to learn the dynamical system despite the missing the incomplete state information. This is surprising since a conventional ODE system cannot output the correct derivatives without the full state as the input. We implement augmented neural ODEs and differential equation solvers in the julia programming language. MRI Image Reconstruction via Learning Optimization Using Neural ODEs2020-06-30   ${\displaystyle \cong }$ We propose to formulate MRI image reconstruction as an optimization problem and model the optimization trajectory as a dynamic process using ordinary differential equations (ODEs). We model the dynamics in ODE with a neural network and solve the desired ODE with the off-the-shelf (fixed) solver to obtain reconstructed images. We extend this model and incorporate the knowledge of off-the-shelf ODE solvers into the network design (learned solvers). We investigate several models based on three ODE solvers and compare models with fixed solvers and learned solvers. Our models achieve better reconstruction results and are more parameter efficient than other popular methods such as UNet and cascaded CNN. We introduce a new way of tackling the MRI reconstruction problem by modeling the continuous optimization dynamics using neural ODEs.